BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031C01LP1|AL429352
(921 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 1721 0.0
>3x_Contig1530
Length = 6216
Score = 1721 bits (865), Expect = 0.0
Identities = 904/915 (98%), Gaps = 4/915 (0%)
Strand = Plus / Plus
Query: 10 cctgttga-cttgact-tagtttgacattgtgaagagacatagagggtgtagcataagtg 67
|||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4442 cctgttgagcttgactctagtttgacattgtgaagagacatagagggtgtagcataagtg 4501
Query: 68 ggagcttcggcgccagtgaaataccactacctttatagtttctttacttattcaattaag 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4502 ggagcttcggcgccagtgaaataccactacctttatagtttctttacttattcaattaag 4561
Query: 128 cggastgggaattcattttccacgttctagcattcaaagtcctatacgggctgatccggg 187
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4562 cggagctggaattcattttccacgttctagcattcaaagtcctatacgggctgatccggg 4621
Query: 188 ttgaagacattgtcaggtggggagtttggctggggcggcacatctgttaaacgataacgc 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4622 ttgaagacattgtcaggtggggagtttggctggggcggcacatctgttaaacgataacgc 4681
Query: 248 agatgtcctaagggggactcatggagaacagaaatctccagtagaacaaaagggtaaaag 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4682 agatgtcctaagggggactcatggagaacagaaatctccagtagaacaaaagggtaaaag 4741
Query: 308 tccccttgattttgattttcagtgtgaatacaaaccatgaaagtgtggcctatcgatcct 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4742 tccccttgattttgattttcagtgtgaatacaaaccatgaaagtgtggcctatcgatcct 4801
Query: 368 ttaggtcctcggaatttgaggctagaggtgccagahaagttaccacagggataactggct 427
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 4802 ttaggtcctcggaatttgaggctagaggtgccagaaaagttaccacagggataactggct 4861
Query: 428 tgtggcagtcaagcgttcatagcgacattgctttttgattcttcgatgtcggctcttcct 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4862 tgtggcagtcaagcgttcatagcgacattgctttttgattcttcgatgtcggctcttcct 4921
Query: 488 atcataccgaagcagaattcggtaagcgttggattgttcacccactaatagggaacgtga 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4922 atcataccgaagcagaattcggtaagcgttggattgttcacccactaatagggaacgtga 4981
Query: 548 gctgggtttagaccgtcgtgagamaggttagttttaccctactgatgaatgttatcgcaa 607
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 4982 gctgggtttagaccgtcgtgagacaggttagttttaccctactgatgaatgttatcgcaa 5041
Query: 608 tagtaattgaacttagtacgagaggaacagttcattcggataattggtttttgcggctgt 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5042 tagtaattgaacttagtacgagaggaacagttcattcggataattggtttttgcggctgt 5101
Query: 668 ctgatcaggcattgccgcgaa-ctacccatccgctggattatggctgaacgcctctaagt 726
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 5102 ctgatcaggcattgccgcgaagcta-ccatccgctggattatggctgaacgcctctaagt 5160
Query: 727 cagaatccatgctagaacgcgatgatttctttgccttgcacaatatagaaggataaraat 786
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5161 cagaatccatgctagaacgcgatgatttctttgccttgcacaatatagaaggataagaat 5220
Query: 787 aaggcgtctttttggcgtcgctgaaccatagcaggctggcaacggtgctcttagcggaaa 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5221 aaggcgtctttttggcgtcgctgaaccatagcaggctggcaacggtgctcttagcggaaa 5280
Query: 847 ggctttgggtgcttgccggcgaattgcaatgtcattttgcgcaaggataaatcatttgta 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5281 ggctttgggtgcttgccggcgaattgcaatgtcattttgcgcaaggataaatcatttgta 5340
Query: 907 tacgacttaaawgta 921
||||||||||| |||
Sbjct: 5341 tacgacttaaatgta 5355
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4430
Number of Sequences: 1807
Number of extensions: 4430
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 921
length of database: 10,358,551
effective HSP length: 16
effective length of query: 905
effective length of database: 10,329,639
effective search space: 9348323295
effective search space used: 9348323295
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)